How to Number a PDF After Merging Pages
Merge first and number second. A final numbering pass creates one sequence and keeps cover-page arithmetic clear.
Numbering pages is drawing a small piece of text in the same place on every page. The interesting part is not the drawing, it is the two questions of arithmetic that a tool either gets right or gets quietly wrong.
The first is what to do about a title page. A cover is not page 1 in the sense a reader means, so Skip the first page leaves it bare and starts numbering on the next sheet — and that sheet becomes number 1, not 2, because the count follows the numbering rather than the file.
The second is what {total} means. In a twelve-page document with a skipped cover, the honest total is 11: eleven pages carry a number, so the last one reads 11 of 11. A tool that printed 12 there would be describing a page that has no number.
Start at exists for the case where one document continues another. Set it to the number after the last one in the previous file and a split report reads as a single sequence.
Position matters more than it looks. Bottom centre collides with the least existing content across the widest range of documents, which is why it is the default — but a document with its own footer will need one of the corners instead.
Most online page-numbering tools upload the file first. A contract or a set of minutes is not something to hand to a third party for a job this small, and this page never sends it anywhere.
Word processors number pages while you write, which is no help once the document is a PDF — especially one merged from several sources. If you also need a mark on the pages, PDF Watermark is the other common finishing step, and PDF Merger is usually what created the unnumbered file in the first place.